YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85014305, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPLMSAFKA RESKTFCSPI PHRYEQMFKT RKYDLEHFGL TFFQRAVCFS ACLGAGVLSF  60
   61 LYSMIKIVRL SPSGFILPYT ISNFLFFIMF GFLLGFRSYL EGLFSKKKRV HSSWFIGCTL 120
  121 LTLYVVLKYD RYLLNLAFCF IQVVSFIMFS LTFIPGGTSG VSSIISMFFK K

Type	Start	End	Confidence
Cytoplasmic	1	40	0.96
Transmembrane Helix	41	65	0.84
Non-Cytoplasmic	66	74	0.84
Transmembrane Helix	75	96	0.90
Cytoplasmic	97	109	0.81
Transmembrane Helix	110	127	0.93
Non-Cytoplasmic	128	137	0.71
Transmembrane Helix	138	165	0.77
Cytoplasmic	166	171	0.71