YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19074840
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVFLKSLL LILGSVGGLV GFGIGIVKAI DYIEDKAYAA KKHIEAIIQI SAGLHVILLL  60
   61 RGVSILQILF SLSIQYAFYC LLDIYPLVKM DNPYFVYGTI ASLFNHFLVI RLIFSKSAVY 120
  121 GAEIVLYFAL VWTTPFCFFL SLSANDEVLF VRGKASSNTI IGNLLKKYLY KEKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.70
Transmembrane Helix	8	30	0.90
Cytoplasmic	31	50	0.67
Transmembrane Helix	51	74	0.77
Non-Cytoplasmic	75	93	0.68
Transmembrane Helix	94	114	0.92
Cytoplasmic	115	123	0.67
Transmembrane Helix	124	144	0.89
Non-Cytoplasmic	145	174	0.71