YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19173356
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGKLGMLFY LNIEFSGHPR MFKKFSRFKT FFLVVSVIFV LRNIRRLRGS LLLPGRYLLL  60
   61 IAHPDDESMF FAPSLLSLGG DIDILCLSNG NKEGKGKERE KELRKVGCYT GAKVLITTFF 120
  121 SDGEDWDPVM IYIKLLAIYI LRPFDVLMTF DEAGVSGHKN HISCSKGAGL FLKIHSVKGL 180
  181 LLKSKNLFQK YGVDMSFSRI SSTVPFSMYM EPVKMMCFHR SQMVWFRYLY VLFSNFMSYN 240
  241 DFTVIN

Type	Start	End	Confidence
Cytoplasmic	1	24	0.70
Transmembrane Helix	25	44	0.76
Non-Cytoplasmic	45	246	0.56