YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DPH1_ENCCU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATSAILVS TRLSTNSPIL LSNPCFSISS SSLFIRKALS SSFFSSISAS ILGSQISFSN  60
   61 RGALRGHMVV LKQEEVPECL RYLPRNYNFE TGKVLRTIRR LGAKRVTLQF PDGLLRYSFV 120
  121 IMDVIEKYTG AECILLNDVV YGGCCIDDES IASDLLVHYG HSCLVPVGEM STKVLYIFVD 180
  181 IRIDIDHAAE MIRRNFQGKI GVIGTIQFNS SINRLKRVLD EERGGVECTL PQIRPLSSGE 240
  241 VLGCTAPKIE GVSAVISIGD GRFHLEGAMI RNPHLRFYKY CPFSRRMTQE SYDHSTMLSD 300
  301 RKSEIRKAFS GRSFGVILGS LGRQGNRSIL RSVVDRLKEY DVYLIMLDEI SPKKLERYNF 360
  361 IDSFVQISCP RLSIDWGKLF KKPLLTPFEV FYSGGEYLMD YYSREGSGEW KNYR

Type	Start	End	Confidence
Signal Peptide	1	27	0.46
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	414	0.94