YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19173629
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGEMPMDVE HELGWRCSGK QRQVRCTHLS PLKKRKMEPS HEEEGHTQMV KYPSDALGLA  60
   61 TKKARRPSVV NIARVPVVLI GYLHLLLNSV VIGFICYVVV YVLVGLQRDI GYKMISRRAQ 120
  121 IQHQIEEAKT SYRINKCDPA TRVPAIEELC SKWECVIKNG YRSVGYTRII AEVFGDVMDG 180
  181 FVRKFSVRSS LTIGFFFVLF LVFRRAAKA

Type	Start	End	Confidence
Cytoplasmic	1	79	0.85
Transmembrane Helix	80	104	0.84
Non-Cytoplasmic	105	184	0.75
Transmembrane Helix	185	203	0.91
Cytoplasmic	204	209	0.60