YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50198821, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWLVVSVSL IVIWLASFCK IFFRATSISG AAILDDGKTP QKKNVLFVIA HPDDESMFFS  60
   61 PTINYLASNA CNLHMLCLST GNADGMGSIR NNELHRACAV LKVPLQQLKI LNHPNLQDGF 120
  121 GQLWSHDLLT EIIEEEVTKH DIHTIITFDN YGVSGHCNHR DVHRGVLKFL QTNSGRNVKA 180
  181 WELVSLNIFR KYCGPVDIWL SILSAKIHPS KVIIINEQPW KSFKAMAQHL SQWVWFRKLF 240
  241 VSFSSYTYAN TLSRINP

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	257	0.98