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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45383257, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAWALLLGV LLSAATDVWG CDPEQFRCGD GGCISATWVC DGGTECRDGS DEEPEMCRSL  60
   61 QCPAQHFDCG DAVGRERCVP LSWRCDGHRD CRHGADEWGC EPPPCASDQQ RCSDGSCVSR 120
  121 AFLCDGDRDC PDGGDERDCP PPPPCPPASF RCPDGVCVDP AWLCDGDADC ADGADERSPT 180
  181 CAEATAAEAE AAEAEAEEGE GVVPRPAQRC PPLRVPCRSG GCVPRGWRCD GSPDCSDGSD 240
  241 EDGCDPPLCP PEEFRCADDG RCVWGGRRCD GHRDCADGSD EDGCDNAPSC VGPDVFQCRS 300
  301 GECIPTERLC DGRRHCRDWS DEPLQHCDVD ECSQGTSGCS HGCQDRPIGF RCLCPDGFRL 360
  361 GADGKTCEDV DECAEAERCA QLCINLQGAF KCACAEGYAA EPGGRSCRAL APVSELLLWS 420
  421 RRTLRRVAGS AVGRAGLRST QWLRGDFPHG AVADVDVAEG NLYWADPTQR RLFRAPLSPP 480
  481 GAPPTPLQLL EGVPTALALD WVHHVLYWGD STGGALRALP VGGSGGALSA TIWQRNGSEP 540
  541 RGIALDPMLG LLFWSDCGSV PLLGRVGLNG AEPKVLLERG LRCPCGLALD VPSQRLYWAD 600
  601 RQLHSLSSVS VWGGQRRTLL ADPQLLPHPM AVTVFEDSVF WTDAQRGAVL SAPRRSEGEV 660
  661 RVVAESLPGV GGVLVVHPLR QPRGVNVCAP SNGGCEGLCL PAPHTEPHSA PYSCVCGDGL 720
  721 RLEADGRRCQ PDPTAPTPMG PNSTTAAPQP HSTNGAHSTE THSNGAHSNG THSTETHSTN 780
  781 GAHSANGTHS NGTGSTALRS DAVGPPSVGP PSVGPPSVGP PSSVGPQSGL VALAVLLPLA 840
  841 LLGALWALRA LRRWWRRRSS HSISFGNPLF LKEHGGHQWQ SLSGDSGDSG V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle