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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACCA_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISHSSLA LGGASSASAS DYLRSSSNGV NGVPLKTLGR AVFTTIRRKD LAVTSRLKKG  60
   61 KKFEHPWPAN PDPNVKGGVL SYLAEFKPLG DTQKPVTLDF EKPLVELEKK IVDVRKMANE 120
  121 TGLDFTEQII TLENKYRQAL KDLYTHLTPI QRVNIARHPN RPTFLDHIHN ITDKFMELHG 180
  181 DRAGYDDPAI VTGIGTIDGK RYMFIGHQKG RNTKENIMRN FGMPTPHGYR KALRMMYYAD 240
  241 HHGFPIVTFI DTPGAYADLK SEELGQGEAI ANNLRTMFGL KVPILSIVIG EGGSGGALAI 300
  301 GCANKMLMLE NAVFYVASPE ACAAILWKTS KAAPEAAEKL RITSKELVKL NVADGIIPEP 360
  361 LGGAHADPSW TSQQIKIAIN ENMNEFGKMS GEELLKHRMA KYRKIGVFIE GEPIEPSRKI 420
  421 NMKKREAVFS DSRKLQGEVD KLKEQILKAK ETSTEAEPSS EVLNEMIEKL KSEIDDEYTE 480
  481 AAIAVGLEER LTAMREEFSK ASSEEHLMHP VLIEKIEKLK EEFNTRLTDA PNYESLKSKL 540
  541 NMLRDFSRAK AASEATSLKK EINKRFQEAV DRPEIREKVE AIKAEVASSG ASSFDELPDA 600
  601 LKEKVLKTKG EVEAEMAGVL KSMGLELDAV KQNQKDTAEQ IYAANENLQE KLEKLNQEIT 660
  661 SKIEEVVRTP EIKSMVELLK VETAKASKTP GVTEAYQKIE ALEQQIKQKI AEALNTSGLQ 720
  721 EKQDELEKEL AAARELAAEE SDGSVKEDDD DDEDSSESGK SEMVNPSFA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle