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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51873093
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNAKVILLC LVASSSAQGR SSHGRANPDA KRLYDDLLSN YNRLIRPVVN NTETLTVWLG  60
   61 LKLSQLIEVS LRNQVMTTNL WVKQKWFDYK LRWDPEEYGG VEMLYVPSEQ IWLPDIVLYN 120
  121 NWDGNYEVTL MTKATLKYTG EVFWEPPAIY KSSCEMNVEY FPYDEQTCLM KFGSWTYNGA 180
  181 QVELRHLDQI PGSNLVQIGI DLSEFYLSVE WDILEVPASR NEEYYPCCPE PFSDITFKLT 240
  241 MRRKTLFYTV NLIIPCVGIT FLTVLVFYLP SDSGEKVTLC ISILVSLTVF FLLLAEIIPP 300
  301 TSLAVPLLGK YLLFTMILVS LSVWTTVCVL NVWYRSTSTH KMSPFVRRLF LEIMPKILMM 360
  361 RRAKYTLPDY DDSTPSNGYT NEIEMSVSDF PGEFKEGGDS FDNIGVNLSH GSVEAENVIP 420
  421 KQLSPEVLSA IQAVRFIAQH IKDADKDNEI VEDWKFVSMV LDRFFLWVFT ISCIFGTFGI 480
  481 IFQSPSLYDT RAPVDQQLSE IPLRKNNFML PPDIVRITLD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle