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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51859456
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PCGRCSPGSG PVHPLNALLP AMRPAAATAP KWLLLALSAL LPLWPTAKSW ELTILHTNDV  60
   61 HSRLEQTSDD STKCLNASLC VGGVARLFTK VQQIRKEEPN VLLLDAGDQY QGTIWFTVYK 120
  121 GLEVAHFMNL LGYDAMALGN HEFDNGVEGL IDPLLRNVKF PILSANIKAR GPLAPQISGL 180
  181 YLPYKVLSVG GEVVGIVGYT SKETPFLSNP GTNLVFEDEV TALQPEVDKL KTLNVNKIIA 240
  241 LGHSGFEMDK LIAQKVRGVD VVVGGHTNTF LYTGNPPSKE VPAGKYPFIV TSDDGRKVPV 300
  301 VQAYAFGKYL GYLKVEFDDK GNVVTSYGNP ILLNSTIRED AAIKADINQW RIKLDNYSTQ 360
  361 ELGRTIVYLN GSAQECRFRE CNMGNLICDA MINNNLRHPD EMFWNHVSMC IVNGGGIRSP 420
  421 IDERNNGTIT WENLAAVLPF GGTFDLVQLK GSTLKKAFEH SVHRYGQSTG EFLQVGGIHV 480
  481 VYDISRKPWD RVVQLKVLCT KCRVPIYEPL EMDKVYKVVL PSYLVNGGDG FQMIKDELLK 540
  541 HDSGDQDISV VSEYISKMKV IYPAVEGRIK FSAASHYQGS FPLIILSFWA VILVLYQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle