YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50253609, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGIHSLLL LLFYQILLSG CTGLIPEEGK RKYTESGRSS PQHSQSVLNQ FELRLLNMFG  60
   61 LKRRPTPGKN IVIPPYMLDL YHLHSGQLAA DQDSSPMDYQ IERAASRANT VRSFHHEESM 120
  121 EEIPESGEKT IQRFFFNLSS VPNEELVTSA ELRIFREGVQ EPFEGDSSKL HRINIYDIVK 180
  181 PAAAASRGPV VRLLDTRLIH HNESKWESFD VTPAITRWIA HKQPNHGFVV EVTHLDNDKN 240
  241 VPKKHVRISR SLVPDKDSWP RIRPLLVTFS HDGKGHALHK REKRQARHKQ RKRLKSSCRR 300
  301 HPLYVDFSDV GWNDWIVAPP GYHAFYCHGE CPFPLADHLN STNHAIVQTL VNNVNPNIPK 360
  361 ACCVPTELSA ISMLYLDENE KVVLKNYQDM VVEGCGCR

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	398	0.99