YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51859430
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLRPCRFQPP DHVSLSRAAA APAQQQQQLR GRGAVPAAAR WPQQRLWLLF EASQNSYLNP  60
   61 AYGHLWHRRD FGPAVVLTYY LSRPTGSWVE LPMNSSNGNG NGNGKNGGLE HVPSSSSIHN 120
  121 GDMEKILLDA QHESGQSSSR GSSHCDSPSP QEDGQIMFDV EMHTSRDHSS QSEEEVVDGE 180
  181 KEVEALKKSA DWVSDWSSRP ENIPPKEFLF RHPKRAASLS MRKSGAMKKG GIFSAEFLKV 240
  241 FIPSLFLSHV LALGLGIYIG KRLSTPSAST Y

Type	Start	End	Confidence
Cytoplasmic	1	236	0.65
Transmembrane Helix	237	259	0.80
Non-Cytoplasmic	260	271	0.72