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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115463921, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASVRSLRR LSSSSSSSSL SPASLRRLLL LLHRPPPPPP PPRPPLPPFQ TLARGILPRI  60
   61 AARPVPRRFS TASCSSTLFR VGECGAPGAT AIPEAERGEE EEREGEDGGE ADAAVEVAAG 120
  121 RHDTDAYAAV ELALDSVVKV FTVSSSPNYF LPWQNKAQRE SMGSGFVIPG RRIITNAHVI 180
  181 ADHTFVLVRK HGSPTKYKAE VQAVGHECDL ALLKVDSEEF WDGMNSLELG DIPFLQEAVA 240
  241 VVGYPQGGDN ISVTKGVVSR VEPTQYAHGA TQLMAIQIDA AINPGNSGGP AIMGDKVAGV 300
  301 AFQNLSGAEN IGYIIPVPVI KRFISGVEES GKYSGFCTLG ISCQATENIQ LRECFGMKPD 360
  361 LTGVLVSRIN PLSDAHRVLK KDDILLEFDG VPIANDGTVP FRNRERITFD HLVSMKKPGE 420
  421 MAVLKVLRDG KEHELNVTVR PLQPLVPVHQ FDKLPSYYIF AGFVFIPLTQ PYLHEFGEDW 480
  481 YNNSPRRLCE RALRELPKKA AEQLVILSQV LMDDINVGYE RLAELQVKKV NGVEVENLKH 540
  541 LCSLVESCTE ENLRFDLDDE RVIVLKYQNA KLATSRILKR HRIPSAISAD LVDEQATDDG 600
  601 EEATNGEIEA SCTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle