YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215701461, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPLLKIGH GLDRFRWRRS TSSSSSSPLA LSLSSSSAAA LSDDDPGSPM DPEMPPAARR  60
   61 ALSRSSGSRG RLSFELPPLA GGPSDKEEAP PRTSSAPAPA RPAPAALHEG PPSDAEMVRE 120
  121 KFSKLLLGED MSGTGKGVSS ALALSNAITN LAASVFGEQR RLQPMAADQK ARWRREIDWL 180
  181 LSVSDHIVEF VPSKQVSEDG STMEIMITQQ RRDLQMNIPA LRKLDAMLLE YLDNFKDKQE 240
  241 FWYVSKDASE SEKGNTPRQD DRWWLPTVRV PPGGLSDASR KWVQHQKDLV NQVLKAAMAI 300
  301 NANVLMEMDV PEAYIESLPK NGKSTLGDSM YKIITEDHFN PEELLGTVDM SAEYNIIDLK 360
  361 NRIEASVVIW QRKMVHKEGK LSWGHGVKFE KREKFEARAE NVLLLIKHRF PGIAQSALDI 420
  421 SKIQYNRDIG LAILESYSRT LESLAFTVMS RIEDVLHADS LAQASNTRTQ ESMRMASLSR 480
  481 YDTDKVVIDA KAEVERLGRM EPVSATLFDF VSPRDQDVVA TKMDSKEKGC RGDAHSRKLT 540
  541 KVSPIATKRY SYLEKLENLS GTRSPISRH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle