YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15705131, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLDKFTYF TQFFWSCLFL FTFYIAICND GDGLLGISRI LKLRNQLLSH QENNIRSKDP  60
   61 NSLEDILRKG FSTGVSYMYS SLFEVSQWCN AVDLLGKRRR IPLISCFGEI SGSRGMERNI 120
  121 LYLISKSSYS TSSNPGWGIT CRNDITLIHV PHGQRSFDGL YDSFFHFWID ETVLDPTCFQ 180
  181 RRERPPRTSS HNKKNHRTIP PASILLAPFL TEKNSK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.50
Transmembrane Helix	8	28	0.72
Non-Cytoplasmic	29	216	0.60