YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24417332
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTT NTEFVKSSCT FTTYPRLCFS  60
   61 SLSTHASLIQ TSPKLMAHAA LNITLASAKV TSAMMVRLSN SRLKPKEVSA MRDCVEELGD 120
  121 TLEELRKSIG EMCQLSGSNY EVYISDIQTW VSAALTDVNT CTDGFEGEDM DGKVKVLVRG 180
  181 RILVIAHLTS NALALINHFA SIHG

Type	Start	End	Confidence
Cytoplasmic	1	7	0.80
Transmembrane Helix	8	29	0.80
Non-Cytoplasmic	30	74	0.81
Transmembrane Helix	75	96	0.60
Cytoplasmic	97	181	0.79
Transmembrane Helix	182	202	0.61
Non-Cytoplasmic	203	204	0.82