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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15221773, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRIVDNALA ITKESVKTLT YESLNNIARC INGFSALLLT LLPGKSNVLE GLHGWELRPT  60
   61 LRGPRLPRWM HNGVSSFNHF IHELSVDSDT SSLDYSSGDD DSDGMSTPPS PLSQSSLRSW 120
  121 ASLPANYESH WTDWITFIVW WALLPARILL WVPLYLLRLL ARRNSRMQPL SPGRYQHSSR 180
  181 PCFSKAISGK EHDVPNRTTD KRRGVIEDLQ LGIEIFIETI FDFFHKAAHL LLSPSETFGI 240
  241 VLSWFSSSSH SSKGNYGDVS DDEIIQTAIL GDNDSSLTER RTTTSLYNTD TRTCQDVITE 300
  301 LGYPYEAIRV VTSDGYGLLL ERIPRRDARK AVYLQHGVMD SSMGWVSNGV VGSPAFAAYD 360
  361 QGYDVFLGNF RGLVSRDHVK KNISSKDFWR YSINEHATED IPAMIEKIHE IKTSELKLYQ 420
  421 PTMEEVVNED QPYKLCVVSH SLGGAAVLMY VITRKIEEKP HRLSRLILLS PAGFHYDSNM 480
  481 CFTLMEYTFL FLGPVLSRIV PAFYIPTKFF RMLLNKLARD FHNYPAVGGL VQTLMSYVVG 540
  541 GDSSNWVGVM GLPHYNMNDM PGISFRVAQH LAQIKHSGKF KMFDYGSSSA NMDVYGSPEP 600
  601 LDLGEFYGLI DVPVDLVAGK KDKVIRPSMV RKHYRVMRDS GVDVSYNEFE YAHLDFTFSH 660
  661 REELLAYVMS RLLLVEPTQT QTVHKKGMKL KKKMETGKPH L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle