YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASPA_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSINRNLLNI IIILCICLNL GCNDGAQERE TDSHTIQVSS LLPSSSSSCV LSPRASTTKS  60
   61 SLHVTHRHGT CSRLNNGKAT SPDHVEILRL DQARVNSIHS KLSKKLATDH VSESKSTDLP 120
  121 AKDGSTLGSG NYIVTVGLGT PKNDLSLIFD TGSDLTWTQC QPCVRTCYDQ KEPIFNPSKS 180
  181 TSYYNVSCSS AACGSLSSAT GNAGSCSASN CIYGIQYGDQ SFSVGFLAKE KFTLTNSDVF 240
  241 DGVYFGCGEN NQGLFTGVAG LLGLGRDKLS FPSQTATAYN KIFSYCLPSS ASYTGHLTFG 300
  301 SAGISRSVKF TPISTITDGT SFYGLNIVAI TVGGQKLPIP STVFSTPGAL IDSGTVITRL 360
  361 PPKAYAALRS SFKAKMSKYP TTSGVSILDT CFDLSGFKTV TIPKVAFSFS GGAVVELGSK 420
  421 GIFYVFKISQ VCLAFAGNSD DSNAAIFGNV QQQTLEVVYD GAGGRVGFAP NGCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle