YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15241057, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRCLTKKVF LIQSPILFLH LLISLSSGAV KPDLKGVCVS KGGRFPPYEL EGKPPKSVGR  60
   61 GSKDLTLCRV FRKKTCCSSV QTNPAFVAVR NLATYGEASQ ECLELFELLE CSICNPNVGI 120
  121 QPGPPRICAS FCDRVFEACK DAYFASNALK RVIGPCGVND DIICIKASNW ESNGTSFCEA 180
  181 AGFAVQRNDD SREKPCYGSK ASLESVVESW SRDSRKETPL KTETLSCFKD LLQWVREMTT 240
  241 IQKISLGMSF LIAGMFLIRQ SNNRNQKQRL AAIQRTARRL RGNGNGDSYS AAINRRTSSD 300
  301

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	300	0.90