YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TA2R7_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYETDTTLM FVAVCEALVG ILGNAFIALV NFMGWMKNRK ITAIDLILSS LAMSRICLQC  60
   61 IILLDCIILV QYPDTYNRGK EMRIIDFFWT LTNHLSVWFA TCLSIFYFFK IANFFHPLFL 120
  121 WIKWRIDKLI LRTLLACLIL SLCFSLPVTE NLTDDFRRCV KTKERINSTL RCKLNKAGYA 180
  181 SVKVNLNLVM LFPFSVSLVS FLLLILSLWR HTRQMQLNVT GYNDPSTTAH VKATKAVISF 240
  241 LVLFIVYCLA FLIATSSYFM PESELAVIWG ELIALIYPSS HSFILILGNS KLKQASVRVL 300
  301 CRVKTMLKGR KY

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.91
Transmembrane Helix	9	33	0.87
Cytoplasmic	34	50	0.78
Transmembrane Helix	51	72	0.84
Non-Cytoplasmic	73	93	0.86
Transmembrane Helix	94	114	0.85
Cytoplasmic	115	128	0.86
Transmembrane Helix	129	148	0.95
Non-Cytoplasmic	149	187	0.97
Transmembrane Helix	188	209	0.92
Cytoplasmic	210	235	0.95
Transmembrane Helix	236	259	0.88
Non-Cytoplasmic	260	266	0.85
Transmembrane Helix	267	288	0.89
Cytoplasmic	289	312	0.93