YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23820959
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRVALRSA AARQSASTAL VARSSATDVA GVRDEKNFPR PVRGEPGKVR LGFVPEEWFQ  60
   61 FFHSKTGVTG PYTFGVGLAT YLCSKEIYVM EHEYYSGLSL LVMIYVAAKK LGPSISAYLD 120
  121 KEVDAVEAGW NEGRAETIKS LEDAIAEEKK SQWRAEGQEL LVQAKRENVL LQLEAAYWER 180
  181 LMNTYTEVKR RLDYQLEKSN LERRLAQRHM VDWIVTNVTK AITPDQEKQT LDRCIADLAA 240
  241 LAPRK

Type	Start	End	Confidence
Signal Peptide	1	26	0.92
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	245	0.99