YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGRC2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGDGDVKL STLGSGGESG GDGSPGGAGA TAARSSWVAA LLATGGEMLL NVALVALVLL  60
   61 GAYRLWVRWG RRGLCSGPGA GEESPAATLP RMKKRDFSLE QLRQYDGART PRILLAVNGK 120
  121 VFDVTKGSKF YGPAGPYGIF AGRDASRGLA TFCLDKDALR DEYDDLSDLN AVQMESVREW 180
  181 EMQFKEKYDY VGRLLKPGEE PSEYTDEEDT KDHSKQD

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.78
Transmembrane Helix	40	63	0.84
Cytoplasmic	64	217	0.84