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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89268073, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYGAGRDKY EPAATSEQGG KKKKGKGKDK DMDELKKELT MEDHKLSLDE LHRKFGTDMQ  60
   61 RGLSTARAAE ILARDGPNAL TPPPTTPEWV KFCRQLFGGF SMLLWIGAIL CFLAYGITAA 120
  121 TEEEPTNDNL YLGVVLSAVV IITGCFSYYQ EAKSSKIMES FKNMVPQQAL VIRNGEKLSI 180
  181 NAEDVVLGDL VEVKGGDRIP ADVRIISAHG CKVDNSSLTG ESEPQTRSPD FTNENPLETR 240
  241 NIAFFSTNCV EGTARGVVVN TGDRTVMGRI ATLASGLEGG RTPIAIEIEH FIHIITGVAV 300
  301 FLGVSFFILS LILQYTWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR MARKNCLVKN 360
  361 LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA DTTENQSGAS FDKSSPTWTA 420
  421 LSRVAGLCNR AVFQAGQENT PILKRDVAGD ASESALLKCI ELCCGSVRDM REKNPKVAEI 480
  481 PFNSTNKYQL SVHKNANPSE SRYILVMKGA PERILDRCST IVLQGKEQPL DEELKDAFQN 540
  541 AYLELGGLGE RVLGFCHLAL SDDQFPDGFQ FDTEEVNFPT ENLCFVGLIS MIDPPRAAVP 600
  601 DAVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI PVNQVNPRDA 660
  661 KACVIHGSDL KDMAQEQIDD ILKHHTEIVF ARTSPQQKLI IVEGCQRQGA IVAVTGDGVN 720
  721 DSPALKKADI GIAMGIAGSD VSKQAADMIL LDDNFASIVT GVEEGRLIFD NLKKSIAYTL 780
  781 TSNIPEITPF LIFIVANIPL PLGTVTILCI DLGTDMVPAI SLAYEQAESD IMKRQPRNPK 840
  841 TDKLVNERLI SMAYGQIGMI QALGGFFTYF VILAENGFLP WTLLGIRVNW DDRWNNDVED 900
  901 SYGQQWTYEQ RKIVEFTCHT AFFVSIVVVQ WADLIICKTR RNSVFQQGMK NKILIFGLFE 960
  961 ETALAAFLSY CPGMDVALRM YPLKPTWWFC AFPYSLLIFI YDEVRKLIIR RSPGGWVEKE1020
 1021 TYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle