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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VM3H3_BOTJA
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQVLLVTIC LAAFPYQGSS IILESGNVND YEVVYARKVT ALPKGAVQPK YEDTMQYELK  60
   61 VNGEPVVLHL EKNKQLFSKD YSETHYSPDG REITTYPPVE DHCYYHGRIE NDADSTASIS 120
  121 ACNGLKGHFK LQGETYFIEP LKLPNSEAHA VFKYENVEKE DEVPKMCGVT QTNWESDEPI 180
  181 KKASQLVVTA EQQRYNHYKY IELVILADYR MVTKNNGDLG KIRTKIYEIV NILNEIFRYL 240
  241 YIRIALVGIE IWSNADLSNV TLSADDTLAS FGTWRGTVLL KRKSHDNAQL LTAIDFDGQT 300
  301 IGIANIASMC NQNKSVGVVM DYSPINLVVA VIMAHEMGHN LGINHDTGSC SCGGYSCIMA 360
  361 PEISDQPSKL FSNCSKQAYQ RYINYYKPQC ILNEPLRTDI VSPPVCGNEL LEMGEECDCG 420
  421 SPRNCRDPCC DAATCKLHSW VECESGECCD QCRFKGAGTE CRAARSECDI AESCTGQSAD 480
  481 CPTDDFKRNG QPCLHNYGYC YNGNCPIMYH QCYALFGSNA TVAEDGCFEF NENGDKYFYC 540
  541 RKQSGVNIPC AQEDVKCGRL FCHTKKHPCD YKYSEDPDYG MVDNGTKCAD GKVCSNGHCV 600
  601 DVATAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle