YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47121744
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLKILLCSS IFLFFLKPNV PKGAYGLKNV CKLNFLNFNG FLPLYKTNKY FSKHDENLYE  60
   61 SWDVKPLWNA KPFSLMKLPF NPQDMSPFLS EEAIKYHYSK HHATYVKNLN NLSEQHKDLK 120
  121 SLTLEDIIKK YDGSIHNNAA QIFNHNFFWL GLKEQGGGMP YGEIKEKLDE SFNSFENFKN 180
  181 EFIKQASGHF GSGWIWLIIK DRKLEIFQGH DADSPIKQNI GKPILTLDIW EHSYYVDYKN 240
  241 SRADYIKEWF NKINWDFANY NLSISS

Type	Start	End	Confidence
Signal Peptide	1	26	0.94
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	266	0.99