YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48309976, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGWFPMSG TSSSGDQQQQ PLQTGGTSLL ADWNSYAASR DFEEDTGTLG FDIESAVRSA  60
   61 NDTVSGTFNV VSKGVRDNLQ SATSSMPSGK ALMYFGLLLA SGVFFIFIAF TMFLPVMVLM 120
  121 PQKFAICFTL GCGFIIGSFF ALRGPQNQLA HMSSAERLPL TLGFIATMVG TIYVSMVLHS 180
  181 YILSVIFSAL QVIALAYYCI SYFPGGSSGM KFLSSTLTSS VFRMFGR

Type	Start	End	Confidence
Cytoplasmic	1	91	0.98
Transmembrane Helix	92	114	0.92
Non-Cytoplasmic	115	123	0.71
Transmembrane Helix	124	142	0.97
Cytoplasmic	143	157	0.89
Transmembrane Helix	158	183	0.82
Non-Cytoplasmic	184	188	0.60
Transmembrane Helix	189	213	0.72
Cytoplasmic	214	227	0.84