YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51260641
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSSCLALVCT SPMAPADIPA SLPLGLCLLL ASGFGHAGKL LVVPMDGSHW FTMQMVVEKL  60
   61 LPKGHEVVVV VPEVSWQLGK PLNFTVKTYS VSHTQEDLNR EFKFFIDSQW KTQQEGGVLP 120
  121 LLTSPAQGFF ELLFSHCRSL FKDKKLVEYL KQSSFDAVFL DPFDVCGLTV AKYFSLPSVV 180
  181 FSRGIFCHYL EEGSQCPSPP SYVPRGILKL TDTMTFKERV WNLLSYMGEH AFCPSFFKTA 240
  241 TDIASEVLQT PVTMTDLFSP VSVWLLRTDF TLELPRPVMP NVIHIGGINC HQRKPLSKEF 300
  301 EAYVNASGEH GIVVFSLGSM VSEIPEKKAM EIAEALGRIP QTVLWRYTGT RPSNLAKNTI 360
  361 LVKWLPQNDL LGHPKARAFI THSGSHGIYE GICNGVPMVM MPLFGDQMDN AKRMETRGAG 420
  421 VTLNVLEMTA DDLENALKTV INNKSYKENI MRLSSLHKDR PIEPLDLAVF WVEYVMRHKG 480
  481 APHLRPAAHD LTWYQYHSLD VIGFLLAIVL TVVFIVYKSC AYGCRKCFGG KGRVKKSHKS 540
  541 KTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle