YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERGI3_XENTR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLHRLRQF DAYPKTLEDF RVKTCGGALV TVISGLIMLI LFFSELQYYL TKEIYPELFV  60
   61 DKSRGDKLKI NIDVIFPHMP CAYLSIDAMD VAGEQQLDVE HNLFKQRLDK DKKPVTSEAD 120
  121 RHELGKSEEH VVFDPKSLDP NRCESCYGAE TDDFSCCNTC DDVREAYRRR GWAFKTPDSI 180
  181 EQCKREGFSQ KMQEQKNEGC QVYGFLEVNK VAGNFHFAPG KSFQQSHVHV HDLQSFGLDN 240
  241 INMTHEIRHL SFGRDYPGLV NPLDGSSVAA MQSSMMFQYF VKIVPTVYVK VDGEVLRTNQ 300
  301 FSVTRHEKMT NGLIGDQGLP GVFVLYELSP MMVKLTEKHR SFTHFLTGVC AIIGGVFTVA 360
  361 GLIDSLVYYS TRAIQKKIEL GKAT

Type	Start	End	Confidence
Cytoplasmic	1	19	0.93
Transmembrane Helix	20	43	0.88
Non-Cytoplasmic	44	344	0.92
Transmembrane Helix	345	368	0.85
Cytoplasmic	369	384	0.77