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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45361637, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.74
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSAGFFLC FIAAIAVSSR AQDLVNEDVK RTVDLSSHLA KVTAEVTISN PGPGAVHSFL  60
   61 LALEPELGSR LAYLGVKGED EEDGALEIQE TKVKGKSGMQ YTVRFGSSLA PGAKTKVTVE 120
  121 TVFTHVLQPY PTQITQAEKQ FVTFEGNHYF FSPYPTKSQT TRVKLASRNV ETYTKLGNPT 180
  181 RSEDLIEYGP FKDIAPWSQD LLKVHYENNS PFLTITSMTR LIEVSHWGNI AVEETVDLKH 240
  241 TGAYLKGPFS RYDYQRQPDS GISSVKSFKT ILPAAAQDVY YRDEIGNIST SHLLILDDSV 300
  301 EMEIRPRFPL FGGWKTHYII GYNLPSYEYL YNLGDQYALK MRFIDHVFDD QVVDSLTVKI 360
  361 VLPEGAKNVH VDNPYDINRA PDELHYTYLD TFGRTVIVAH KNNLVEQHIQ DIVVHYSFNK 420
  421 ILMLQEPLLV VGAFYILFFT VILYVRLDFS ITKDPAAEAR MKAACITEQI LTLVNKRLGL 480
  481 YRHFDEAVNK YKLSRDIATL NSGKKTLETE HKNLTNEIAS LQSKLKAEGS DLCDKVAEIQ 540
  541 KLDSQVKEIV LKSSSEAERL VSGKLKKETY IENEKQHSSR RQELVNKIDN ILVGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle