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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45361317, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILRCTWVLL LYASYHVLLV SSQGKDNFNP EVGLLQLIGE PVPEQITKVF GPDKTPAYVF  60
   61 GKEANTGQVA QYHLPNPMYR DFSLLFHVQP TTDKAGILFA ITDASQSIVY IGVKLSEVKD 120
  121 GKQDIIFYYT EPGSQDSYVA ATFNVPSLVN RWSRFAISVE EEEVVLFMDC DELERVRFER 180
  181 SPDEMELEDG SGLFVAQAGG ADPDRYQGVI ADLKIVADPR AAEHQCEEDG DDSDGISGDF 240
  241 GSGIADNDLV TSPPVIIKVQ PPITVPPIQR TPVEKEIVQT GQGQQGVKGE KGDRGEKGER 300
  301 GLTGPKGDGG NASPTSDSKG EKGQKGEVGV KGSAGFGYPG PKGQKGDPGD LGPRGPPGPP 360
  361 GPSILQKSDG TTVQQVTGPP GPQGPAGPPG KEGEPGDPGE DGKTGEVGPQ GFPGTPGDSG 420
  421 QKGDKGDSGV GIRGAPGPPG PPGPPGPSRT DKLTFIDMEG SGYGGDSEHI RGAPGVPGPP 480
  481 GPPGVPGLPG VPGTFGMNNT GLPGPPGLPG LPGKEGIPGP PGPPGLPGKD GLSGTPGAAG 540
  541 LRGEDGEIGL PGAPGTKGST GEPGLPGPPG QSGLAGLPGP MGPRGLPGPP GPPGPVGHGS 600
  601 AIGFDDMEAS GLGFGLREGT QGVPGLPGAK GEPGHPGLPG VKGDSGFPGL EGRPGLDGFP 660
  661 GPEGLKGEKG ERGERGESGR DGVGIPGPPG PPGQVLYLPS DDKTIVGAIP GPEGPRGPKG 720
  721 EAGLNGIPGT FGVKGEKGEP GIIMGPDSTI YTDSSKGEKG DEGPRGPAGA AGPFGQKGEI 780
  781 GFPGRPGRPG MNGLKGEKGE PSGASGGFGL RGPPGPPGPP GPPGSVVYGD PNNPGAQVYP 840
  841 GHKGERGFPG PKGDVGPAGP PGSFPYDLST FASILRREAG LKGEKGESGG GSHGQGIPGP 900
  901 PGNPGYPGLP GAKGDSVQGP PGPAGPPGPS GIGYEGRQGP PGPPGPPGLP GSSSYPGPHR 960
  961 QTISIPGPPG PPGPPGLPGT SGGLSGATVL QTYQTMINLA HRLQEGTIVL VQERSELYVR1020
 1021 VREGFRKILL GEYTTSSGPG QDNEVAAEQA PVVPYPHRNK DSDYLQSTEE NSNNPNVPSG1080
 1081 ARPWSDPRLP EPPRVNPPPP PDHHHHGNPR PLEPSPVHTH QEFNPVLHLV ALNTPLSGSM1140
 1141 KSIRGVDFQC FEQARKAGLH GTFRAFLSSR LQDLYSIVRR ADRQSVQIVN LRDEVLFDNW1200
 1201 ESLFSGSEAQ MRPGASIFSF DGKDVATDPT WPQKMVWHGS DSKGRRLTES YCETWRTDEG1260
 1261 AVTGQASSLT SGKLLEQRPQ SCNKNFIVLC IENSFMTNNR K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle