YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89272892, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRAALTSA SALRKTAPLS VGLLNQCRSF HKGQPAMAPV PPLPEKGGKV RFGLIPEEFF  60
   61 QFLYPKTGVT GPYMLGTGLL VYLLSKEIYV INHETFAAAS IGIVIVYGIK KFGPSVAAFA 120
  121 DKLNEEKVAK AQAVKDSALK NLERAIEEEN KEQWRVEGRH HLFDAKRNNV TMLLEINYRE 180
  181 RILNVYNEVK KRLDYQVALQ HLQRRKEQDH MINWVEKNVI QSITPQQQKE SIAKCITDLK 240
  241 VLSKTAQASV

Type	Start	End	Confidence
Signal Peptide	1	29	0.84
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	250	0.97