YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45360823, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEENKGSE QSGSDWKQFI YNPQSGEFMG RTASSWALIL LFYLVFYGFL AGLFTLTMWV  60
   61 MLQTLDDSVP KYRDRVSSPG LMISPKSAGL EIKFTRNKTQ SYQEYIQTLH TFLTPYNDAI 120
  121 QAKNDLCAPG LYFDQDEKDE KKACQFNRSS LGLCSGIEDN TFGYNEGKPC VIVKMNRIIG 180
  181 LKPEGNPKIN CTSKTEDVNL QYFPENGKID LMYFPYYGKK THVNYVQPLV AVKIIPPPYN 240
  241 SSLDEISLEC KIHGSRNLKN EDERDKFLGR VTFKVKIWV

Type	Start	End	Confidence
Cytoplasmic	1	37	0.85
Transmembrane Helix	38	61	0.90
Non-Cytoplasmic	62	279	0.87