YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOM40_XENTR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVLAASSP APPAAGSPPA PGLVSVPPGF TMPPVAGLTP TPDKKETQED RLPNPGTFEE  60
   61 CHRKCKELFP IQMEGVKLTV NKGLSNYFQV NHTVSLSMIG ESNYHFGATY VGTKQLGPAE 120
  121 AFPVLVGDLD NSGSLNAQII HQVTSNVRSK IALQTQQSKF VNWQLDTEYR GEDFTAAVTL 180
  181 GNPDILVGSG ILVAHYLQSI TPSLALGGEL VYHRRPGEEG TVMSLAGRYT APNWTATLTL 240
  241 GQAGAHATYY HKANDQLQVG VEFEASTRMQ DTSVSFGYQL DLPKANLLFK GSVDSNWIVG 300
  301 ATLEKKLPPL PLTLAMGAFL NHKKNKFQCG FGLTIG

Type	Start	End	Confidence
Signal Peptide	1	16	0.83
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	336	0.99