YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LITAF_XENTR
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTSGNYQPV PIGFTVPSAP PSYEEATFHH PPYPPLHQGM DAKNMSNPPY IVQPVPMQPP  60
   61 VTVQTVYVQQ AMTLYDRPVQ MCCRSCNSMI TTRLEYSSGA LAWLSCGGLC LLGCIGGCCL 120
  121 IPFCIDSLKD VDHYCPNCHA LLGSYKRI

Type	Start	End	Confidence
Cytoplasmic	1	99	0.71
Transmembrane Helix	100	124	0.81
Non-Cytoplasmic	125	148	0.81