YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SC22B_XENTR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLTMIARV ADGLPLAASM QEDEQSGRDL QQYQNQAKQL FRKLNEQSPT RCTLEAGAMT  60
   61 FHYLIEKGVC YLVLCEAAFP KKLAFAYLED LFSEFDEQHG KKVPTVSRPY SFIEFDNYIQ 120
  121 KTKKSYIDSR ARRNLSSVNT ELQDVQRIMV ANIEEVLLRG EALSALDSKA SNLSTLSKKY 180
  181 RQDAKYLNMR STYAKLAAVA VFSVMLIVYI RFWWL

Type	Start	End	Confidence
Cytoplasmic	1	190	0.92
Transmembrane Helix	191	213	0.89
Non-Cytoplasmic	214	215	0.83