YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38174102, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSLLAITA RRLRVFPAAL CAQTRLYAAA ATERKKFYEN VSISHGEGGF EINLDRRKLR  60
   61 TPQGKIFTAP SEALAVAVAT EWDCQRDVIK FYTMHLTTLC NTALDNPTLR NKEQLITAAL 120
  121 KFLETDTVCY RVEEPPGLVE LQRNEWDPVI EWAEKRYNVV IGSSTSIQGP IIPTETKDVF 180
  181 SRHLASYNSW GLLGIEFIIS QLKSLVLTMG LIDRHLPVEK AVLLSRLEEE YQIQRWGNVE 240
  241 WAHDYDLQEL RSRTAAGTLF VHLCSESSTI KHKLLQD

Type	Start	End	Confidence
Signal Peptide	1	30	0.96
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	277	0.99