YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89272030, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARLFETIG KLGLGLAVAG GVVNSALYNV DAGHQAVIFD RFRGVQETVV GEGTHFLIPW  60
   61 VQKPIIFDCR SRPRNVPVVT GSKDLQNVNI TLRILFRPMG NQLPRIFTSI GEDYDERVLP 120
  121 SITTEILKSV VARFDAGELI TQRELVSRQV SEDLMERAAT FGLILDDVSL THLTFGKEFT 180
  181 EAVEAKQVAQ QEAERARFIV EKAEQQKKAA VISAEGDSKA AELIATSLAD AGDGLIELRK 240
  241 LEAAEDIAYQ LSRARNVTYL PSGQSTLLQL PQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	272	0.99