YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51493294
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEKVEKPD TKEKKPEAKK VDAGGKVKKG IPDLPCIPER PCRRGSTQPL NPRLKRKRRR  60
   61 RFLQLLQNQL VGTILIILTG RHRGKRVVFL KQLASGLLLV TGPLVLNRVP LRRTHQKFVI 120
  121 ATSTKIDISN VKIPKHLTDA YFKKKKLRKP RHQEGEIFDT EKEKYEITEQ RKIDQKAVDS 180
  181 QILPKIKAIP QLQGYLRSVF ALTNGIYPHK LVF

Type	Start	End	Confidence
Cytoplasmic	1	61	0.96
Transmembrane Helix	62	81	0.84
Non-Cytoplasmic	82	87	0.79
Transmembrane Helix	88	109	0.80
Cytoplasmic	110	213	0.82