YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47523922, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSAASSEH FEKLHEIFRG LHEDLRGVPE RLLGIAGTEE KKKLIRDFDE KQQEANETLA  60
   61 EMEEELRYAP LSFRNPMMSK LRTYRKDLAK LHREVRSTPL TAAPGGRGDM KYGTYAVEDE 120
  121 HMNRLQSQRV LLLQGTDSLN RATQSIERSH RIAAETDQIG SEIIEELGEQ RDQLERTKSR 180
  181 LVNTSENLSK SRKILRSMSR KVTTNKLLLS LVILLELAIL GGLVYYKFFR RL

Type	Start	End	Confidence
Cytoplasmic	1	205	0.72
Transmembrane Helix	206	226	0.92
Non-Cytoplasmic	227	232	0.63