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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47523670, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMLNFYGR VVLVTGAGGG LGRTYALAFA ERGASVVVND LGGDMKGVGK GSLAADKVVE  60
   61 EIRRKGGKAV ANYDSVEAGE KIVKAALDAF GRIDVVVNNA GILRDRSFSR ISDEDWDMIQ 120
  121 RVHLRGSFMV TRAAWDHMKK QNFGRIIMTS SAAGIYGNFG QANYSAAKLG LLGLSNSLAV 180
  181 EGKKNNIHCN TVAPVAGSRM TQGFLPEDLI EALKPEYVAP LVLWLCHESC EENGSVFEVG 240
  241 AGWIGKLRWE RTLGALVRQK NQPMTPEAVK ANWTKICDFD NATKPQRIQD SVSTVIEALS 300
  301 KIDSSDGGIS ANNLSHATSA APSGLVEAVG YKFPPFSSSY TEVDTIMYAF GVGASIKEPK 360
  361 DLKFIYEGNS DFSCLPTFGV ILAQKSLGGG GLAEIPGLSV NFTKVLHGEH YLELYKPLPN 420
  421 AGDLKCEAVV ADVLDKRSGL VILIDVYSYS GKELICYNQF SVFVMGSGGF GGKRTSDKDK 480
  481 VAVAIPNRPP DAILTDTTSL NQAALYRLSG DWNPLHIDPD FASLAGFDRP ILHGLCTFGF 540
  541 SARHVLQQYA DRDVLRFKAI KVRFAKPVYP GQTLQTEMWK EGNRIHFQTK VQETGDTVIS 600
  601 NAYVDLVPTS DTLAKIPSEG GDLQSNLVFE EIGRRLQDIG QEMVKKVNAV FEWHITKGEK 660
  661 IAAKWTIDLK NGAGKVYQGP AKGSADATFI LSDEVFMEVV LGKLDPQKAF FSGRLKARGN 720
  721 IMLSQKLQMI LKDYAKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle