YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IMPA1_PIG
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPWQECMD YAVTLARQAG EIVREALKNE MNIMIKSSPA DLVTATDEKV EKMLISSIKE  60
   61 KYPSHSFIGE ESVAAGEKSV LTDNPTWIID PIDGTTNFVH GFPFVAVSIG FVVNKGMEFG 120
  121 VVYSCMEDKM YTGRKGRGAF CDGQKLQVSP QKDVTNSLLV TELGSSRTPE TVRIILSNME 180
  181 RLLCIPIHGI RGVGTAALNM CFVAAGVADA FYEMGIHCWD MAGAGIIVTE AGGVLMDITG 240
  241 GPFDLMSRRV IASSNKALGE RIAKEIQIIP LQRDDED

Type	Start	End	Confidence
Cytoplasmic	1	186	0.86
Transmembrane Helix	187	208	0.82
Non-Cytoplasmic	209	220	0.74
Transmembrane Helix	221	241	0.81
Cytoplasmic	242	277	0.84