YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19550842, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSENCSTTE TNSLHPNRGQ PSNATGPHFA THHEGSLQVP IPCAVVNVVF ITVLIIALIA  60
   61 LSVGQYNCPG QYVPSVPSNM HVSSCPDDWI GYQTKCYFIS KKTKNWTLAQ SFCSKHHGAT 120
  121 LALLESKEDM VFLKQHVGRA EHWIGLKNED GQTWKWSNGK EFNNWFKLTG SKNCPFLNST 180
  181 EVGSMECEKN LHWICSKSSI

Type	Start	End	Confidence
Cytoplasmic	1	40	0.68
Transmembrane Helix	41	64	0.77
Non-Cytoplasmic	65	200	0.80