YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7513461
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEDVAATG ADPSELEGGG LLHEIFTSPL NLLLLGLCIF LLYKIVRGDQ PAASDSDDDE  60
   61 PPPLPRLKRR DFTPAELRRF DGVQDPRILM AINGKVFDVT KGRKFYGPEG PYGVFAGRDA 120
  121 SRGLATFCLD KEALKDEYDD LSDLTPAQQE TLNDWDSQFT FKYHHVGKLL KEGEEPTVYS 180
  181 DEEEPKDESA RKND

Type	Start	End	Confidence
Non-Cytoplasmic	1	24	0.84
Transmembrane Helix	25	43	0.71
Cytoplasmic	44	194	0.64