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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45384426, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLLLVFVC LQAITTAASA ELSDSSDGLE VKIPEQSPLR VVLGSSLNIP CYFNIPEEED  60
   61 TNALLTPRIK WSKLSNGTEI VLLVATGGKI RLNAEYREVI SLPNYPAIPT DATLEIKALR 120
  121 SNHTGIYRCE VMYGIEDRQY TIEVLVKGVV FHYRAISTRY TLNFERAKQA CIQNSAVIAT 180
  181 PEQLQAAYED GYEQCDAGWL ADQTVRYPIH LPRERCYGDK DEFPGVRTYG VRETDETYDV 240
  241 YCYAEQMQGK VFYATSPEKF TFQEAFDKCH SLGARLATTG ELYLAWKDGM DMCSAGWLAD 300
  301 RSVRYPISRA RPNCGGNLVG VRTVYLNPAN QTGYPHPSSR YDAICYSGDD FEALVPGLFT 360
  361 DEVGTELGSA FTIQTVTQTE VELPLPRNVT EEEARGSIAT LEPMEITSTA TELYEAFTVL 420
  421 PDLFATSVTV ETASPREENV TREEITGIWA VPEEVTTSVS GTAFTTGMAE VSSVEEAIAV 480
  481 TATPGLESAS PFTIEDHLVQ VTAAPDVALL PRQPISPTGV VFHYRAATSR YAFSFIQAQQ 540
  541 ACLENNAVIA TPEQLQAAYE AGFDQCDAGW LRDQTVRYPI VNPRSNCVGD KESSPGVRSY 600
  601 GMRPASETYD VYCYIDRLKG EVFFATQPEQ FTFQEAQLYC ESQNATLASA GQLHAAWKQG 660
  661 LDRCYPGWLA DGSLRYPIVR PRPACGGDAP GVRTIYQHHN QTGFPDPLSR HHAFCFRALP 720
  721 SVVEEGVTSL FEEEVMVTQL IPGVEGIPSG EETTVETELS SEPESQTAQG TEVFPTDVSL 780
  781 LSARPSAFPP ATVIPEETST NASIPEVSGE FPESGEHPTS GEPSASGAPD TSGEPTSVGF 840
  841 ELSGEQSGIG ESGLPSVDLQ SSGFVPGESG LPSGDVSGLP SGIVDISGLP SAEEEVTVSV 900
  901 SRIPEVSGMP SGAESSGLHS GFSGEISGTE LISGLPSGEE SGLASGFPTI SLVDSTLVEV 960
  961 VTAAPGRQEE GKGSIGVSGE EELSGFPSAE WDSSGARGLP SGAETSGEQS GVPELSGEHS1020
 1021 GVPGLSGEAF EVPELSGEHS GVTELSGEHS GLPELSGVPF GVPELSGFPS GLDISGEPSG1080
 1081 APEVSGPVDV SGLTSGVDGS GEVSGVTFIS TSLQEVTTPS VAEAEAKEIL EISGLPSGET1140
 1141 SGMVSGSLDV SGQPSGHIGF GGSASGVLEM SGFPGGAVES SGEASGVEVT SGLASGEESG1200
 1201 LTSGFPTVSL VDTTLVEVVT QTSVAQEVGE GPSGMIEISG FLSGDRGVSG EGSGAVQSSG1260
 1261 LPSGTGDFSG EPSGIPYFSG DISGATDLSG QPSAVTDISG EDSGLPEVTL VTSDLVEVVT1320
 1321 RPTVSQELGG ETAVTFPYVF GPSGEGSASG DLSGGASAEG GIETSTAYEI SGESSAFPET1380
 1381 SIETSTDQEI SGEASAYPEI SVETSTHLET SGETSAYPEI STETSTIQEV SGETSAFPEI1440
 1441 STETSTIQEI SGETSAFPEI RIETSTFQEI SGETSAFPEI RIETSTSQEA RGETSAFAEI1500
 1501 TIEASTVHET SGETSAFPEI SIETSTVHET SGETSAFPEI SIETSTVHEI SGESSAFPEI1560
 1561 RIETSTSQEA RGETSAFPEI TTEASTIQEI SGETSAFPEI SIETSTVREI SGETSAFPEI1620
 1621 RIETSTSQEA RGETSALPEI TIETSTVHET SGEASAFPEI SIETSTRQEA RGEASAYPEV1680
 1681 SIEASTTQEV SGESSAFPEI SVETSTSQEA RGETSAFPEI GIETSTAHEG SGETPGLPAV1740
 1741 STDTAATSLA SGEPSGAPEK ETPDTTSHLI TGVSGETSVP DAVISTSAPD VELAQEPRNT1800
 1801 EETQLEIEPS TPAASGQETE TAAVLDNPHL PATATAALHP ASQEAVDALG PTTEDTDECH1860
 1861 SSPCLNGATC VDGIDSFKCL CLPSYGGDLC EIDLANCEEG WIKFQGHCYR HFEERETWMD1920
 1921 AESRCREHQA HLSSIITPEE QEFVNSHAQD YQWIGLSDRA VENDFRWSDG HSLQFENWRP1980
 1981 NQPDNFFFAG EDCVVMIWHE QGEWNDVPCN YHLPFTCKKG TVACGDPPVV ENARTFGRKK2040
 2041 DRYEINSLVR YQCDHGYIQR HVPTIRCQPN GHWEEPRISC TNPSSYQHRL YKRSPRSRLR2100
 2101 PGVVHRPTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle