YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45384406, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGLRFDGR VVLVTGAGGG LGRAYALAFA ERGASVVVND LGGDFKGYGK SSSAADKVVS  60
   61 EIRANGGKAV PNYDSVEDGE KLVKSALEAF GRIDIVINNA GILRDRSFVR ISDEDWDIIH 120
  121 RIHLRGSFLV TRAAWNHMKN QKFGRIIMTS SAAGIYGNFG QANYSAAKLG LLGLSNTIAI 180
  181 EGRKYNIHCN TIAPTAGSRL TQTVMPQDLI DAFKPEYVAP LVLWLCHETC MENGSLFEVG 240
  241 AGWIGKLRWE RSLGAIVRGK DQPMTPEAVR DKWEKVCDFN NASKPRSIQE SISVLNDALS 300
  301 QIESQGSISM NSTNSRSVVS SAVDTTSLVG RELTTKVYKY THLEPILYAL GVGMSTKDPD 360
  361 HLKFLFEGSE EFCCLPTFGV IPAQTSMFDG VPSIPGLDMD LAKMLHGEQY LELYKPLPTS 420
  421 GELRSVSTIA DLLDKGSGAV LLIDVNTYCG KDLVCYNQFS LFFVGAGGFG GKRTSEKAKV 480
  481 TVNPPKRPPD AILSDVTTSD QAALYRLSGD WNPLHLDPSF AALGGFQKPI LHGLCTFGFA 540
  541 ARNVLKQFAN NDVTRFKAIK VRFAKPVFPG QTLQTEMWKE GNRIHFQTKV KETGDLAIAG 600
  601 GYVDIVSALD KPSALEPTAG LQSDLVFEEI GRRIKEVGHE LVRKVNAVFQ WDITKDGKTA 660
  661 VQWTIDLKNG SGSVYQGPAR SSADTTFTLS DQDFMDVVQK KTNPQKAFFS GKLKVKGNIM 720
  721 LSQKLEMILK DYAKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle