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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4878035, gi|4...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHVMGDAGC WLLLGLTLLP IAVLGSQDDG KVIHISRVQH QAVRVGLGEP VALPCLFLLH  60
   61 PSASLGPNEP PDPPRVKWSK VRSASGQRED VPILVAKDNV VKVVKAYEGR VSLPGYARDR 120
  121 YNGTLLLRAA RASIAGLYRC EVVAGIDDEQ DLLPLEVMGV VFHYRPAGAR YALTFAAARR 180
  181 ACMDNSAVIA SPQHLQAAFE DGYDNCDAGW LADQSVRYPI TLSRPGCYGD RNSLPGVRSY 240
  241 GQREPGELYD VYCYARELQG KVFYATAPGR FTLSGARRHC RGRGAALATT GQLYLAWREG 300
  301 LDQCDPGWLA DGSVRYPILA PRRKCGGEAP GVRTLYRFPN RTGFPLPASK FDAYCYKGDA 360
  361 AGAPDSSAEQ RELEPLGSDN VLVEHEDMAT SGDSPRAGVL PQLGAAGPDG AEDEQLRLAS 420
  421 SVTAAWRGDI PGGSSMASAS SPSSSVRPLE DEALNAVDPA LRGSPRELFG TSPAPALREF 480
  481 PDPTEPLFTL HPQTQSPAQE VTSLPPAAPA LGTVPIVAAE TPGTPKQSSY AGLNGRYFQL 540
  541 QQQSRDPSVV QDPTVAGDHT VAEDPVGTVT QAPILALEVK GAAANAVETW CITRPSAESP 600
  601 HRGGPYPLSN EVEEEVGHKL LAPSTIPVPP SRRDLPQWSP PTAPHGPGGP TRTSLPSSPP 660
  661 TLMAPGDTSH HQDVSTGEAQ PRGDSPQPPA DVIEDFSGDV APKEDDSPIP PWPPLPPAPL 720
  721 VAEGPRTAAQ PSSDSSGALG DGSLERQRKA VTFVLPPVGL PGSPSPTALS SPHPQSRLSP 780
  781 TVPQGALKMG AEPTHEHLDV GTGPWDEAAI TSVAPDVPSA PPTDSKVTPG LGSEWPSEGS 840
  841 GRVGDGPTAA PQHPNPSAPG LEGEEYPPHP LDPQQPPSPG EEYTSGEAKS DPPPSTATHS 900
  901 PAPPDTHGPS PTAPHPWVPE GPEAPSAGPL FELTTPGGAG GALLLDADSG SGEEPVLEER 960
  961 ELLVWADTSN SSQHAPADPC QTNPCLHGGT CHANGSICGC SCAPGFTGEN CEIDIDDCLS1020
 1021 SPCQNGGTCI DEVNAFVCLC LPSYSGSRCE KDTEGCDHNW HKFQGHCYRY FSRRRSWEDA1080
 1081 ERDCRRRAGH LTSIHSQEEH GFINSFGHEN TWIGLNDRIV EQDFQWTDNT GLQYENWREN1140
 1141 QPDNFFAGGE DCVVLVSHEI GKWNDVPCNY NLPYICKKGT VLCGPPPEVE NAFLVGKKKE1200
 1201 RYSIHSSVRY QCEEGFTQRH IPTIRCHSNG KWDRPKLLCT KPRRSHRARR HHRHRHSHPH1260
 1261 HQHHHHKPRK ERRKHRKHLR LDWMEEGHYF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle