YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADRM1_CHICK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSGALFPS LVPGSRGSSS KYLVEFRAGK MSLKGSTVTP DKRKGLVYIQ QTDDSLIHFC  60
   61 WKDRTSGNVE DDLIIFPDDC EFKRVPQCTT GRVYVLKFKA GSKRLFFWMQ EPKTDKDEEH 120
  121 CRKVNEYLNN PPMPGALGGN ASGGHELSAL GGEGGLQSLL GNMSHNQLMQ LIGPTGLGGL 180
  181 GGLGALTGPG LASLLGSGGF PTSSSSSSSR SQSAAVTPSS TTSSTHVTPA PAVPAAASVT 240
  241 SPSPVPSSGS GTSSATSPTQ PIQLSDLQNI LATMNVPSGA GGQQVDLATV LTPEIMAPIL 300
  301 ANAEVQERLM PYLPSGESLP QTAEEIQNTL TSPQFQQALS MFSAALASGQ HGPLMSQFGL 360
  361 PAEAIDAANK GDVEAFAKAM QNSVKSDQKE GDSKDKKDEE EDMSLD

Type	Start	End	Confidence
Signal Peptide	1	17	0.62
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	406	0.77