YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PI15_CHICK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIIAAISCV FLFSILCETS ALVLPNSTDL LLSNNNFTDI ETALAAHLDS AKIPKARRKR  60
   61 YISQNDMIAI LDYHNQVRGK VFPPASNMEY MVWDETLAKS AEAWAATCIW DHGPSYLLRF 120
  121 LGQNLSVRTG RYRSILQLVK PWYDEVKDYA FPYPQDCNPR CPMRCYGPMC THYTQMVWAT 180
  181 SNRIGCAIHT CQNMNVWGSV WRRAVYLVCN YAPKGNWIGE APYKVGVPCS ACPPSYGGSC 240
  241 TDNLCFPGVT SNYLYWFK

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	258	0.99