YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45383566, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVRVAAVF ARSLPRQAGL VSRNALGAAF VATRNIHASK MRFQKTGTAE VSSILEERIL  60
   61 GADTSAELEE TGRVLSIGDG IARVYGLRNV QAEEMVEFFF GLKGMSLNLE PDNVGVVVFG 120
  121 NDRLIKEGDV VKRTGAIVDV PVGEELLGRV VVALGNPIDG KGPITSKTRR RVGLKAPGII 180
  181 PRISVREPMQ TGIKAVDSLV PIGRGQRELI IGDRQTGKTS IAIDTIINQK RFNDGTDEKK 240
  241 KLYCIYVAIG QKRSTVAQLV KRLTDADAMK YTIVVSATAS DAAPLQYLAP YSGCSMGEYF 300
  301 RDNGKHALII YDDLSKQAVA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE RAAKMNDSFG 360
  361 GGSLTALPAI ETQAGDVSAY IPTNVISITD GQIFLETELF YKGIRPAINV GLSVSRVGSA 420
  421 AQTRAMKQVA GTMKLELAQY REVAAFAQFG SDLDAATQQL LNRGVRLTEL LKQGQYVPMA 480
  481 IEEQVAVIYA GVKSHLDKLE PSKITKFESA FLAHVLSQHQ ALLSTIRTEG KISDQTEAKL 540
  541 KEIFTNFLST FEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle