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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45383822, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSFQQSSL SRDSQGHGRE LSAGIGLLAA ATQSLNMPAS LGRMNQGTAR LASLMNLGMS  60
   61 SSLNQQGSHS ALSSGSTSSH NLQSIFNIGS RGPLPLSSQH RGDADQATNI LASFGLSARD 120
  121 LDELSRYPED KITPENLPQI LLQLKRRRAE EGYGRDGRSS TREPPYRVPR DDWEEKRHFR 180
  181 RDSFDDRGPS LNPVVDYDHG SRSQESGYYD RMDYEDDRLR DGERCRDESF YGETSHNYHK 240
  241 FDSEYDRMGR GPGPERSLFE KKRGAPPNSN IEDFHGFLPK GYPHLCSICD MPVHSNKEWN 300
  301 HHINGATHGR RCQLLLEIYP EWNPDSDSGH GMGDPFMLQQ STNPAPGILG PPPPPFHLGG 360
  361 PPVGPRGAGN GNMQGPRHMQ KGRVETSRVV HIMDFQRGKN LRYQLLQLVE PFGIITNHLI 420
  421 LNKINEAFIE MSTTEDAQAA VEYYSTTPAL VFGKPVRVHL SQKYKRIKKP EGKPDQKTEA 480
  481 PKPELGRVIH LSNLPHSGYS DNAVLKLAEP YGKIKNYILM RMKSQAFIEM ETREDALAMV 540
  541 EHCANKALWF QGRCVKVDLS EKYKKLVLRI PNKGVELLKK DKTRKRTYSP DSKDSPSDKK 600
  601 SKTDATQKPE SGTVEDKAKE EKQDDTAEPS GTKSSEQADQ DEPSLLLESE DELLVDEEEA 660
  661 AALLESGSSA GDDADVANLT DVTTEEKKDP ADDVTVKTEG NVVANPATKK KLKKRYVGGF 720
  721 PRSMEGFVTL DEVGDEEDSD HQKLRKSGLA VKSAGKNDDS LAEIKVDKIE EPEQENETLE 780
  781 NGTKTEDNLK AEAVEASDTT AAQDPEKNAH ENIDTQDEQE TKSVQEKALI PDEFRIGPYQ 840
  841 PNVPVGVNYV VPKTGFYCKL CSLFYTNEDV AKKTHCSSLP HYQKLKKILD KMAEDYRQKK 900
  901 EA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle